Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Pectobacteriaceae
Genus
Pectobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Pectobacteriaceae |
| Genus | Pectobacterium |
| Species | Pectobacterium carotovorum |
| Strain | strain S1.15.11.2D |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Bacilli |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | Not Available |
| Biotic relationship | Free living |
| Host(s) | Viridiplantae, Solanum tuberosum, Daucus carota |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1180518 bp
Thymine Count
1171732 bp
Guanine Count
1226236 bp
Cytosine Count
1240350 bp
Genome Length
4818836 bp
Protein-coding Genes
4141 genes
Non-Coding Genes
122 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| polyphosphate kinase 1 | D5071_12425 | Not Available | Positive | 2729619 - 2731691 | 80195.6 |
| exopolyphosphatase | D5071_12430 | Not Available | Positive | 2731691 - 2733226 | 58233.5 |
| putative motility protein | D5071_12435 | Not Available | Positive | 2733580 - 2733768 | 6379.65 |
| duf2633 family protein | D5071_12440 | Not Available | Positive | 2733998 - 2734213 | 8239.23 |
| organic hydroperoxide resistance protein | D5071_12445 | Not Available | Negative | 2734502 - 2734927 | 14484.4 |
| marr family transcriptional regulator | D5071_12450 | Not Available | Negative | 2735115 - 2735564 | 16913.6 |
| magnesium transporter | D5071_12455 | Not Available | Positive | 2735783 - 2737261 | 54420.1 |
| galactokinase | D5071_12460 | Not Available | Negative | 2737341 - 2738504 | 42096.2 |
| galactose-1-phosphate uridylyltransferase | D5071_12465 | Not Available | Negative | 2738514 - 2739554 | 40117.2 |
| hth-type transcriptional regulator galr | D5071_12470 | Not Available | Positive | 2740018 - 2741028 | 36494.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Soft rot | Causes | PMC11149725 |
| Potato blackleg | Causes | PMC11677604 |
| Potato soft rot | Causes | PMC5376619 |
