Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Pectobacteriaceae
Genus
Pectobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Pectobacteriaceae |
| Genus | Pectobacterium |
| Species | Pectobacterium carotovorum |
| Strain | strain S1.15.11.2D |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Bacilli |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | Not Available |
| Biotic relationship | Free living |
| Host(s) | Viridiplantae, Solanum tuberosum, Daucus carota |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1180518 bp
Thymine Count
1171732 bp
Guanine Count
1226236 bp
Cytosine Count
1240350 bp
Genome Length
4818836 bp
Protein-coding Genes
4141 genes
Non-Coding Genes
122 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| 5-(carboxyamino)imidazole ribonucleotide synthase | D5071_12375 | Not Available | Positive | 2717719 - 2718789 | 39344.3 |
| haaap family serine/threonine permease | D5071_12380 | Not Available | Positive | 2719335 - 2720624 | 46933.0 |
| hypothetical protein | D5071_12385 | Not Available | Negative | 2720672 - 2720911 | 8811.25 |
| l-serine ammonia-lyase | D5071_12390 | Not Available | Positive | 2720886 - 2722253 | 49596.9 |
| xre family transcriptional regulator | D5071_12395 | Not Available | Negative | 2722510 - 2722947 | 16287.7 |
| hypothetical protein | D5071_12400 | Not Available | Positive | 2723333 - 2723797 | 16513.4 |
| duf4879 domain-containing protein | D5071_12405 | Not Available | Negative | 2723844 - 2724401 | 20012.3 |
| phosphate abc transporter atp-binding protein | D5071_12410 | Not Available | Negative | 2724624 - 2725439 | 30731.9 |
| phosphate abc transporter permease psta | D5071_12415 | Not Available | Negative | 2725455 - 2727101 | 60982.1 |
| abc transporter permease subunit | D5071_12420 | Not Available | Negative | 2727098 - 2729278 | 80186.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Soft rot | Causes | PMC11149725 |
| Potato blackleg | Causes | PMC11677604 |
| Potato soft rot | Causes | PMC5376619 |
