Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Pectobacteriaceae
Genus
Pectobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Pectobacteriaceae |
| Genus | Pectobacterium |
| Species | Pectobacterium carotovorum |
| Strain | strain S1.15.11.2D |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Bacilli |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | Not Available |
| Biotic relationship | Free living |
| Host(s) | Viridiplantae, Solanum tuberosum, Daucus carota |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1180518 bp
Thymine Count
1171732 bp
Guanine Count
1226236 bp
Cytosine Count
1240350 bp
Genome Length
4818836 bp
Protein-coding Genes
4141 genes
Non-Coding Genes
122 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| pts lactose/cellobiose transporter subunit iia | D5071_12275 | Not Available | Negative | 2696342 - 2696665 | 12155.9 |
| iron abc transporter substrate-binding protein | D5071_12280 | Not Available | Positive | 2697166 - 2698182 | 36368.9 |
| iron abc transporter permease | D5071_12285 | Not Available | Positive | 2698335 - 2699912 | 56929.6 |
| abc transporter atp-binding protein | D5071_12290 | Not Available | Positive | 2699915 - 2700970 | 37622.1 |
| 4-amino-4-deoxy-l-arabinose-phosphoundecaprenol flippase subunit arnf | D5071_12295 | Not Available | Negative | 2701002 - 2701394 | 14368.4 |
| 4-amino-4-deoxy-l-arabinose-phospho-udp flippase | D5071_12300 | Not Available | Negative | 2701394 - 2701735 | 12660.1 |
| lipid iv(a) 4-amino-4-deoxy-l-arabinosyltransferase | D5071_12305 | Not Available | Negative | 2701732 - 2703402 | 62463.4 |
| 4-deoxy-4-formamido-l-arabinose- phosphoundecaprenol deformylase | D5071_12310 | Not Available | Negative | 2703420 - 2704313 | 33565.0 |
| bifunctional udp-4-amino-4-deoxy-l-arabinose formyltransferase/udp-glucuronic acid oxidase arna | D5071_12315 | Not Available | Negative | 2704310 - 2706343 | 75880.8 |
| undecaprenyl-phosphate 4-deoxy-4-formamido-l-arabinose transferase | D5071_12320 | Not Available | Negative | 2706340 - 2707329 | 36709.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Soft rot | Causes | PMC11149725 |
| Potato blackleg | Causes | PMC11677604 |
| Potato soft rot | Causes | PMC5376619 |
