Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Pectobacteriaceae
Genus
Pectobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Pectobacteriaceae |
| Genus | Pectobacterium |
| Species | Pectobacterium carotovorum |
| Strain | strain S1.15.11.2D |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Bacilli |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | Not Available |
| Biotic relationship | Free living |
| Host(s) | Viridiplantae, Solanum tuberosum, Daucus carota |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1180518 bp
Thymine Count
1171732 bp
Guanine Count
1226236 bp
Cytosine Count
1240350 bp
Genome Length
4818836 bp
Protein-coding Genes
4141 genes
Non-Coding Genes
122 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| fad-binding protein | D5071_12220 | Not Available | Negative | 2685969 - 2687402 | 53339.4 |
| acyl carrier protein | D5071_12230 | Not Available | Negative | 2688519 - 2688740 | 8162.86 |
| d-alanine--poly(phosphoribitol) ligase | D5071_12235 | Not Available | Negative | 2688758 - 2690191 | 53342.2 |
| membrane-bound o-acyltransferase | D5071_12240 | Not Available | Negative | 2690188 - 2691306 | 42853.2 |
| dltd | D5071_12245 | Not Available | Negative | 2691436 - 2692572 | 43569.8 |
| hypothetical protein | D5071_12250 | Not Available | Positive | 2693058 - 2693462 | 15403.2 |
| hypothetical protein | D5071_12255 | Not Available | Negative | 2693550 - 2693924 | 14306.6 |
| hypothetical protein | D5071_12260 | Not Available | Negative | 2693964 - 2694437 | 17825.3 |
| lysr family transcriptional regulator | D5071_12265 | Not Available | Negative | 2694613 - 2695506 | 33082.9 |
| cupin domain-containing protein | D5071_12270 | Not Available | Positive | 2695800 - 2696240 | 15721.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Soft rot | Causes | PMC11149725 |
| Potato blackleg | Causes | PMC11677604 |
| Potato soft rot | Causes | PMC5376619 |
