Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Pectobacteriaceae
Genus
Pectobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Pectobacteriaceae |
| Genus | Pectobacterium |
| Species | Pectobacterium carotovorum |
| Strain | strain S1.15.11.2D |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Bacilli |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | Not Available |
| Biotic relationship | Free living |
| Host(s) | Viridiplantae, Solanum tuberosum, Daucus carota |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1180518 bp
Thymine Count
1171732 bp
Guanine Count
1226236 bp
Cytosine Count
1240350 bp
Genome Length
4818836 bp
Protein-coding Genes
4141 genes
Non-Coding Genes
122 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| inovirus gp2 family protein | D5071_00620 | Not Available | Positive | 120717 - 121340 | 23935.6 |
| hypothetical protein | D5071_00635 | Not Available | Positive | 122691 - 122945 | 9547.92 |
| hypothetical protein | D5071_00645 | Not Available | Negative | 123235 - 123498 | 10086.3 |
| hypothetical protein | D5071_00655 | Not Available | Negative | 123766 - 123969 | 7677.06 |
| acyl carrier protein | D5071_00660 | Not Available | Positive | 124387 - 124653 | 9685.35 |
| hypothetical protein | D5071_00665 | Not Available | Positive | 124655 - 125551 | 34035.6 |
| hypothetical protein | D5071_00670 | Not Available | Positive | 125544 - 126209 | 24961.9 |
| acyl-coa dehydrogenase | D5071_00675 | Not Available | Positive | 126199 - 127287 | 40133.0 |
| mate family efflux transporter | D5071_00680 | Not Available | Positive | 127309 - 128679 | 49859.6 |
| aminopeptidase | D5071_00685 | Not Available | Positive | 128727 - 130301 | 58016.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Soft rot | Causes | PMC11149725 |
| Potato blackleg | Causes | PMC11677604 |
| Potato soft rot | Causes | PMC5376619 |
