Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Pectobacteriaceae
Genus
Pectobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Pectobacteriaceae |
| Genus | Pectobacterium |
| Species | Pectobacterium carotovorum |
| Strain | strain S1.15.11.2D |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Bacilli |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | Not Available |
| Biotic relationship | Free living |
| Host(s) | Viridiplantae, Solanum tuberosum, Daucus carota |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1180518 bp
Thymine Count
1171732 bp
Guanine Count
1226236 bp
Cytosine Count
1240350 bp
Genome Length
4818836 bp
Protein-coding Genes
4141 genes
Non-Coding Genes
122 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| sugar-binding protein | D5071_12010 | Not Available | Negative | 2642402 - 2643193 | 28320.2 |
| hypothetical protein | D5071_12015 | Not Available | Negative | 2643424 - 2644107 | 25677.1 |
| hypothetical protein | D5071_12020 | Not Available | Negative | 2644312 - 2644578 | 9813.58 |
| hypothetical protein | D5071_12025 | Not Available | Positive | 2645103 - 2645642 | 18921.9 |
| alpha/beta hydrolase | D5071_12030 | Not Available | Negative | 2645747 - 2646319 | 21783.8 |
| atp-dependent rna helicase dbpa | D5071_12035 | Not Available | Negative | 2646380 - 2647762 | 50467.0 |
| molybdate abc transporter substrate-binding protein | D5071_12040 | Not Available | Negative | 2647865 - 2648617 | 27563.5 |
| abc transporter atp-binding protein | D5071_12045 | Not Available | Negative | 2648614 - 2649384 | 28081.3 |
| iron abc transporter permease | D5071_12050 | Not Available | Negative | 2649386 - 2650423 | 37150.9 |
| hypothetical protein | D5071_12055 | Not Available | Negative | 2650420 - 2651484 | 39876.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Soft rot | Causes | PMC11149725 |
| Potato blackleg | Causes | PMC11677604 |
| Potato soft rot | Causes | PMC5376619 |
