Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Pectobacteriaceae
Genus
Pectobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Pectobacteriaceae |
| Genus | Pectobacterium |
| Species | Pectobacterium carotovorum |
| Strain | strain S1.15.11.2D |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Bacilli |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | Not Available |
| Biotic relationship | Free living |
| Host(s) | Viridiplantae, Solanum tuberosum, Daucus carota |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1180518 bp
Thymine Count
1171732 bp
Guanine Count
1226236 bp
Cytosine Count
1240350 bp
Genome Length
4818836 bp
Protein-coding Genes
4141 genes
Non-Coding Genes
122 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| protein deglycase yajl | D5071_11910 | Not Available | Positive | 2622441 - 2623031 | 20995.7 |
| trna 4-thiouridine(8) synthase thii | D5071_11915 | Not Available | Negative | 2623067 - 2624515 | 54789.0 |
| exodeoxyribonuclease 7 small subunit | D5071_11920 | Not Available | Positive | 2624768 - 2625016 | 9229.76 |
| (2e,6e)-farnesyl diphosphate synthase | D5071_11925 | Not Available | Positive | 2625013 - 2625924 | 32589.9 |
| 1-deoxy-d-xylulose-5-phosphate synthase | D5071_11930 | Not Available | Positive | 2625943 - 2627808 | 67747.4 |
| phosphatidylglycerophosphatase a | D5071_11935 | Not Available | Negative | 2627877 - 2628413 | 19981.8 |
| thiamine-phosphate kinase | D5071_11940 | Not Available | Negative | 2628388 - 2629368 | 35561.2 |
| n utilization substance protein b | D5071_11945 | Not Available | Negative | 2629437 - 2629856 | 15704.0 |
| 6,7-dimethyl-8-ribityllumazine synthase | D5071_11950 | Not Available | Negative | 2629881 - 2630357 | 16481.9 |
| bifunctional diaminohydroxyphosphoribosylaminopyrimidine deaminase/5-amino-6-(5-phosphoribosylamino)uracil reductase ribd | D5071_11955 | Not Available | Negative | 2630468 - 2631604 | 41107.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Soft rot | Causes | PMC11149725 |
| Potato blackleg | Causes | PMC11677604 |
| Potato soft rot | Causes | PMC5376619 |
