Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Pectobacteriaceae
Genus
Pectobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Pectobacteriaceae |
| Genus | Pectobacterium |
| Species | Pectobacterium carotovorum |
| Strain | strain S1.15.11.2D |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Bacilli |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | Not Available |
| Biotic relationship | Free living |
| Host(s) | Viridiplantae, Solanum tuberosum, Daucus carota |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1180518 bp
Thymine Count
1171732 bp
Guanine Count
1226236 bp
Cytosine Count
1240350 bp
Genome Length
4818836 bp
Protein-coding Genes
4141 genes
Non-Coding Genes
122 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | D5071_11860 | Not Available | Positive | 2611809 - 2612387 | 20772.0 |
| muropeptide mfs transporter ampg | D5071_11865 | Not Available | Positive | 2612447 - 2613934 | 54333.7 |
| cytochrome o ubiquinol oxidase subunit ii | D5071_11870 | Not Available | Positive | 2614360 - 2615322 | 35466.2 |
| cytochrome o ubiquinol oxidase subunit i | D5071_11875 | Not Available | Positive | 2615327 - 2617318 | 74152.6 |
| cytochrome o ubiquinol oxidase subunit iii | D5071_11880 | Not Available | Positive | 2617308 - 2617922 | 22599.9 |
| cytochrome o ubiquinol oxidase subunit iv | D5071_11885 | Not Available | Positive | 2617922 - 2618251 | 11767.7 |
| protoheme ix farnesyltransferase | D5071_11890 | Not Available | Positive | 2618269 - 2619159 | 32282.6 |
| mfs transporter | D5071_11895 | Not Available | Positive | 2619470 - 2620834 | 48674.0 |
| yajq family cyclic di-gmp-binding protein | D5071_11900 | Not Available | Negative | 2620890 - 2621381 | 18382.9 |
| 2-dehydropantoate 2-reductase | D5071_11905 | Not Available | Positive | 2621570 - 2622478 | 33437.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Soft rot | Causes | PMC11149725 |
| Potato blackleg | Causes | PMC11677604 |
| Potato soft rot | Causes | PMC5376619 |
