Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Pectobacteriaceae
Genus
Pectobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Pectobacteriaceae |
| Genus | Pectobacterium |
| Species | Pectobacterium carotovorum |
| Strain | strain S1.15.11.2D |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Bacilli |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | Not Available |
| Biotic relationship | Free living |
| Host(s) | Viridiplantae, Solanum tuberosum, Daucus carota |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1180518 bp
Thymine Count
1171732 bp
Guanine Count
1226236 bp
Cytosine Count
1240350 bp
Genome Length
4818836 bp
Protein-coding Genes
4141 genes
Non-Coding Genes
122 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | D5071_11755 | Not Available | Negative | 2589429 - 2589641 | 8247.18 |
| mgmt family protein | D5071_11765 | Not Available | Positive | 2590110 - 2590430 | 12088.6 |
| hypothetical protein | D5071_11770 | Not Available | Negative | 2590450 - 2591031 | 20457.8 |
| acyl-coa thioesterase ii | D5071_11775 | Not Available | Positive | 2591244 - 2592107 | 32777.0 |
| ammonium transporter amtb | D5071_11780 | Not Available | Negative | 2592246 - 2593538 | 44825.6 |
| p-ii family nitrogen regulator | D5071_11785 | Not Available | Negative | 2593572 - 2593910 | 12275.9 |
| smdb family multidrug efflux abc transporter permease/atp-binding protein | D5071_11790 | Not Available | Negative | 2594271 - 2596049 | 65492.3 |
| smda family multidrug abc transporter permease/atp-binding protein | D5071_11795 | Not Available | Negative | 2596042 - 2597811 | 65808.4 |
| lrp/asnc family transcriptional regulator | D5071_11800 | Not Available | Negative | 2597891 - 2598352 | 17667.5 |
| plp-dependent cysteine synthase family protein | D5071_11805 | Not Available | Positive | 2598721 - 2599797 | 39748.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Soft rot | Causes | PMC11149725 |
| Potato blackleg | Causes | PMC11677604 |
| Potato soft rot | Causes | PMC5376619 |
