Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Pectobacteriaceae
Genus
Pectobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Pectobacteriaceae |
| Genus | Pectobacterium |
| Species | Pectobacterium carotovorum |
| Strain | strain S1.15.11.2D |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Bacilli |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | Not Available |
| Biotic relationship | Free living |
| Host(s) | Viridiplantae, Solanum tuberosum, Daucus carota |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1180518 bp
Thymine Count
1171732 bp
Guanine Count
1226236 bp
Cytosine Count
1240350 bp
Genome Length
4818836 bp
Protein-coding Genes
4141 genes
Non-Coding Genes
122 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| bifunctional udp-sugar hydrolase/5'-nucleotidase | D5071_11655 | Not Available | Negative | 2568558 - 2570207 | 60728.2 |
| kef family k(+) transporter | D5071_11660 | Not Available | Positive | 2570876 - 2572561 | 59758.5 |
| ferrochelatase | D5071_11665 | Not Available | Negative | 2572667 - 2573629 | 36123.6 |
| hypothetical protein | D5071_11670 | Not Available | Negative | 2573643 - 2573822 | 7015.7 |
| adenylate kinase | D5071_11675 | Not Available | Negative | 2573977 - 2574621 | 23803.7 |
| molecular chaperone htpg | D5071_11680 | Not Available | Negative | 2574884 - 2576773 | 71471.9 |
| recombination protein recr | D5071_11685 | Not Available | Negative | 2576948 - 2577553 | 21706.1 |
| ybab/ebfc family nucleoid-associated protein | D5071_11690 | Not Available | Negative | 2577553 - 2577882 | 11975.5 |
| dna polymerase iii subunit gamma/tau | D5071_11695 | Not Available | Negative | 2577923 - 2579995 | 75792.5 |
| adenine phosphoribosyltransferase | D5071_11700 | Not Available | Negative | 2580070 - 2580624 | 19729.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Soft rot | Causes | PMC11149725 |
| Potato blackleg | Causes | PMC11677604 |
| Potato soft rot | Causes | PMC5376619 |
