Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Pectobacteriaceae
Genus
Pectobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Pectobacteriaceae |
| Genus | Pectobacterium |
| Species | Pectobacterium carotovorum |
| Strain | strain S1.15.11.2D |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Bacilli |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | Not Available |
| Biotic relationship | Free living |
| Host(s) | Viridiplantae, Solanum tuberosum, Daucus carota |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1180518 bp
Thymine Count
1171732 bp
Guanine Count
1226236 bp
Cytosine Count
1240350 bp
Genome Length
4818836 bp
Protein-coding Genes
4141 genes
Non-Coding Genes
122 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| fatty acid metabolism transcriptional regulator fadr | D5071_11605 | Not Available | Positive | 2554232 - 2554951 | 27084.4 |
| spovr family protein | D5071_11610 | Not Available | Negative | 2555057 - 2556598 | 60682.8 |
| pilus assembly protein | D5071_11615 | Not Available | Negative | 2557073 - 2558638 | 57920.8 |
| type iv pilus biogenesis protein pilp | D5071_11620 | Not Available | Negative | 2558638 - 2559162 | 18563.3 |
| hypothetical protein | D5071_11625 | Not Available | Negative | 2559162 - 2560469 | 47300.6 |
| piln family type ivb pilus formation outer membrane protein | D5071_11630 | Not Available | Negative | 2560480 - 2562144 | 59439.2 |
| pilus assembly protein | D5071_11635 | Not Available | Negative | 2562158 - 2562610 | 16074.5 |
| pilus assembly protein | D5071_11640 | Not Available | Negative | 2562610 - 2563938 | 47026.6 |
| discoidin domain-containing protein | D5071_11645 | Not Available | Negative | 2564151 - 2566145 | 70454.5 |
| discoidin domain-containing protein | D5071_11650 | Not Available | Negative | 2566307 - 2568322 | 71643.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Soft rot | Causes | PMC11149725 |
| Potato blackleg | Causes | PMC11677604 |
| Potato soft rot | Causes | PMC5376619 |
