Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Pectobacteriaceae
Genus
Pectobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Pectobacteriaceae |
| Genus | Pectobacterium |
| Species | Pectobacterium carotovorum |
| Strain | strain S1.15.11.2D |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Bacilli |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | Not Available |
| Biotic relationship | Free living |
| Host(s) | Viridiplantae, Solanum tuberosum, Daucus carota |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1180518 bp
Thymine Count
1171732 bp
Guanine Count
1226236 bp
Cytosine Count
1240350 bp
Genome Length
4818836 bp
Protein-coding Genes
4141 genes
Non-Coding Genes
122 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| two-component system sensor histidine kinase phor | D5071_11495 | Not Available | Negative | 2509008 - 2510330 | 50696.6 |
| phosphate regulon transcriptional regulator phob | D5071_11500 | Not Available | Negative | 2510358 - 2511047 | 26433.9 |
| hypothetical protein | D5071_11505 | Not Available | Negative | 2511152 - 2511349 | 7435.28 |
| exonuclease subunit sbcd | D5071_11510 | Not Available | Positive | 2511342 - 2512568 | 46087.0 |
| exonuclease subunit sbcc | D5071_11515 | Not Available | Positive | 2512565 - 2516248 | 141087.0 |
| fructokinase | D5071_11520 | Not Available | Negative | 2516252 - 2517163 | 32292.5 |
| recombination-associated protein rdgc | D5071_11525 | Not Available | Positive | 2517451 - 2518380 | 34701.0 |
| methyl-accepting chemotaxis protein | D5071_11530 | Not Available | Negative | 2518489 - 2520279 | 62362.6 |
| pyrimidine/purine nucleoside phosphorylase | D5071_11535 | Not Available | Negative | 2520926 - 2521210 | 10175.2 |
| shikimate kinase arol | D5071_11540 | Not Available | Negative | 2521350 - 2521871 | 18828.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Soft rot | Causes | PMC11149725 |
| Potato blackleg | Causes | PMC11677604 |
| Potato soft rot | Causes | PMC5376619 |
