Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Pectobacteriaceae
Genus
Pectobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Pectobacteriaceae |
| Genus | Pectobacterium |
| Species | Pectobacterium carotovorum |
| Strain | strain S1.15.11.2D |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Bacilli |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | Not Available |
| Biotic relationship | Free living |
| Host(s) | Viridiplantae, Solanum tuberosum, Daucus carota |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1180518 bp
Thymine Count
1171732 bp
Guanine Count
1226236 bp
Cytosine Count
1240350 bp
Genome Length
4818836 bp
Protein-coding Genes
4141 genes
Non-Coding Genes
122 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| s-methyl-5'-thioadenosine phosphorylase | D5071_11445 | Not Available | Positive | 2497788 - 2498693 | 32482.2 |
| had family phosphatase | D5071_11450 | Not Available | Positive | 2498722 - 2499387 | 24103.0 |
| abc transporter substrate-binding protein | D5071_11455 | Not Available | Positive | 2499403 - 2500308 | 32709.8 |
| nudix domain-containing protein | D5071_11460 | Not Available | Positive | 2500305 - 2500910 | 22591.1 |
| mfs transporter | D5071_11465 | Not Available | Positive | 2500935 - 2502107 | 41412.0 |
| laci family transcriptional regulator | D5071_11470 | Not Available | Negative | 2502200 - 2503213 | 37405.1 |
| proline-specific permease proy | D5071_11475 | Not Available | Negative | 2503388 - 2504764 | 50010.6 |
| branched-chain amino acid transport system ii carrier protein | D5071_11480 | Not Available | Negative | 2504906 - 2506225 | 46407.1 |
| 5-methyltetrahydropteroyltriglutamate-- homocysteine s-methyltransferase | D5071_11485 | Not Available | Negative | 2506704 - 2507810 | 41551.9 |
| phosphate abc transporter substrate-binding protein | D5071_11490 | Not Available | Negative | 2508054 - 2508992 | 33555.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Soft rot | Causes | PMC11149725 |
| Potato blackleg | Causes | PMC11677604 |
| Potato soft rot | Causes | PMC5376619 |
