Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Pectobacteriaceae
Genus
Pectobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Pectobacteriaceae |
| Genus | Pectobacterium |
| Species | Pectobacterium carotovorum |
| Strain | strain S1.15.11.2D |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Bacilli |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | Not Available |
| Biotic relationship | Free living |
| Host(s) | Viridiplantae, Solanum tuberosum, Daucus carota |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1180518 bp
Thymine Count
1171732 bp
Guanine Count
1226236 bp
Cytosine Count
1240350 bp
Genome Length
4818836 bp
Protein-coding Genes
4141 genes
Non-Coding Genes
122 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | D5071_11345 | Not Available | Positive | 2475930 - 2476355 | 15248.3 |
| glycoside hydrolase | D5071_11350 | Not Available | Negative | 2476437 - 2478005 | 58640.9 |
| mfs transporter | D5071_11355 | Not Available | Negative | 2478058 - 2479494 | 52631.7 |
| lysr family transcriptional regulator | D5071_11360 | Not Available | Negative | 2479841 - 2480773 | 34950.4 |
| gnat family n-acetyltransferase | D5071_11365 | Not Available | Positive | 2480896 - 2481378 | 18033.6 |
| hypothetical protein | D5071_11370 | Not Available | Negative | 2481483 - 2482232 | 27873.6 |
| dsba family protein | D5071_11375 | Not Available | Negative | 2482761 - 2483417 | 23753.4 |
| mbl fold metallo-hydrolase | D5071_11380 | Not Available | Negative | 2483405 - 2484286 | 31820.2 |
| lysr family transcriptional regulator | D5071_11385 | Not Available | Positive | 2484394 - 2485314 | 34015.3 |
| lysr family transcriptional regulator | D5071_11390 | Not Available | Negative | 2485343 - 2486266 | 34117.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Soft rot | Causes | PMC11149725 |
| Potato blackleg | Causes | PMC11677604 |
| Potato soft rot | Causes | PMC5376619 |
