Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Pectobacteriaceae
Genus
Pectobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Pectobacteriaceae |
| Genus | Pectobacterium |
| Species | Pectobacterium carotovorum |
| Strain | strain S1.15.11.2D |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Bacilli |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | Not Available |
| Biotic relationship | Free living |
| Host(s) | Viridiplantae, Solanum tuberosum, Daucus carota |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1180518 bp
Thymine Count
1171732 bp
Guanine Count
1226236 bp
Cytosine Count
1240350 bp
Genome Length
4818836 bp
Protein-coding Genes
4141 genes
Non-Coding Genes
122 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| pts sorbitol transporter subunit iia | D5071_11240 | Not Available | Positive | 2448914 - 2449285 | 13423.4 |
| ribose 5-phosphate isomerase b | D5071_11245 | Not Available | Positive | 2449404 - 2449862 | 16401.3 |
| transaldolase | D5071_11250 | Not Available | Positive | 2450033 - 2450983 | 35260.0 |
| rpn family recombination-promoting nuclease/putative transposase | D5071_11255 | Not Available | Negative | 2451073 - 2451993 | 35263.4 |
| cation/acetate symporter actp | D5071_11260 | Not Available | Negative | 2452161 - 2453819 | 59296.9 |
| duf485 domain-containing protein | D5071_11265 | Not Available | Negative | 2453816 - 2454127 | 11502.3 |
| acetate--coa ligase | D5071_11270 | Not Available | Negative | 2454253 - 2456214 | 71961.5 |
| hypothetical protein | D5071_11275 | Not Available | Negative | 2456727 - 2456972 | 9429.45 |
| transcriptional regulator | D5071_11280 | Not Available | Positive | 2457117 - 2457509 | 14363.3 |
| sigma-70 family rna polymerase sigma factor | D5071_11290 | Not Available | Positive | 2460979 - 2461503 | 19963.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Soft rot | Causes | PMC11149725 |
| Potato blackleg | Causes | PMC11677604 |
| Potato soft rot | Causes | PMC5376619 |
