Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Pectobacteriaceae
Genus
Pectobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Pectobacteriaceae |
| Genus | Pectobacterium |
| Species | Pectobacterium carotovorum |
| Strain | strain S1.15.11.2D |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Bacilli |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | Not Available |
| Biotic relationship | Free living |
| Host(s) | Viridiplantae, Solanum tuberosum, Daucus carota |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1180518 bp
Thymine Count
1171732 bp
Guanine Count
1226236 bp
Cytosine Count
1240350 bp
Genome Length
4818836 bp
Protein-coding Genes
4141 genes
Non-Coding Genes
122 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| sulfate/thiosulfate abc transporter permease cyst | D5071_11140 | Not Available | Negative | 2423187 - 2424041 | 30747.0 |
| sulfate abc transporter substrate-binding protein | D5071_11145 | Not Available | Negative | 2424041 - 2425069 | 38219.2 |
| dyp-type peroxidase | D5071_11150 | Not Available | Negative | 2425373 - 2426272 | 33488.7 |
| rpoe-regulated lipoprotein | D5071_11155 | Not Available | Negative | 2426444 - 2427043 | 21015.8 |
| abc transporter atp-binding protein/permease | D5071_11160 | Not Available | Negative | 2427232 - 2428905 | 63593.1 |
| insulinase family protein | D5071_11165 | Not Available | Negative | 2428902 - 2431676 | 103955.0 |
| tonb-dependent receptor | D5071_11170 | Not Available | Negative | 2431782 - 2434379 | 97179.2 |
| tonb family protein | D5071_11175 | Not Available | Negative | 2434450 - 2435421 | 34517.9 |
| gnat family acetyltransferase | D5071_11180 | Not Available | Negative | 2435759 - 2436184 | 16353.7 |
| oxygen-dependent coproporphyrinogen oxidase | D5071_11185 | Not Available | Positive | 2436366 - 2437298 | 35224.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Soft rot | Causes | PMC11149725 |
| Potato blackleg | Causes | PMC11677604 |
| Potato soft rot | Causes | PMC5376619 |
