Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Pectobacteriaceae
Genus
Pectobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Pectobacteriaceae |
| Genus | Pectobacterium |
| Species | Pectobacterium carotovorum |
| Strain | strain S1.15.11.2D |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Bacilli |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | Not Available |
| Biotic relationship | Free living |
| Host(s) | Viridiplantae, Solanum tuberosum, Daucus carota |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1180518 bp
Thymine Count
1171732 bp
Guanine Count
1226236 bp
Cytosine Count
1240350 bp
Genome Length
4818836 bp
Protein-coding Genes
4141 genes
Non-Coding Genes
122 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | D5071_11090 | Not Available | Positive | 2412775 - 2412981 | 7713.34 |
| phosphocarrier protein hpr | D5071_11095 | Not Available | Positive | 2413142 - 2413399 | 9059.83 |
| phosphoenolpyruvate-protein phosphotransferase ptsi | D5071_11100 | Not Available | Positive | 2413445 - 2415172 | 63511.5 |
| pts glucose transporter subunit iia | D5071_11105 | Not Available | Positive | 2415321 - 2415830 | 18249.2 |
| hamp domain-containing protein | D5071_11110 | Not Available | Negative | 2415896 - 2417263 | 50866.6 |
| dna-binding response regulator | D5071_11115 | Not Available | Negative | 2417263 - 2417943 | 25409.7 |
| efflux rnd transporter periplasmic adaptor subunit | D5071_11120 | Not Available | Positive | 2418194 - 2419393 | 42494.8 |
| macb family efflux pump subunit | D5071_11125 | Not Available | Positive | 2419397 - 2421349 | 70519.9 |
| cysteine synthase cysm | D5071_11130 | Not Available | Negative | 2421383 - 2422264 | 31680.2 |
| sulfate/thiosulfate abc transporter permease cysw | D5071_11135 | Not Available | Negative | 2422321 - 2423187 | 31594.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Soft rot | Causes | PMC11149725 |
| Potato blackleg | Causes | PMC11677604 |
| Potato soft rot | Causes | PMC5376619 |
