Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Pectobacteriaceae
Genus
Pectobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Pectobacteriaceae |
| Genus | Pectobacterium |
| Species | Pectobacterium carotovorum |
| Strain | strain S1.15.11.2D |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Bacilli |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | Not Available |
| Biotic relationship | Free living |
| Host(s) | Viridiplantae, Solanum tuberosum, Daucus carota |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1180518 bp
Thymine Count
1171732 bp
Guanine Count
1226236 bp
Cytosine Count
1240350 bp
Genome Length
4818836 bp
Protein-coding Genes
4141 genes
Non-Coding Genes
122 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| nitric oxide reductase transcriptional regulator norr | D5071_11040 | Not Available | Negative | 2401050 - 2402600 | 56841.3 |
| anaerobic nitric oxide reductase flavorubredoxin | D5071_11045 | Not Available | Positive | 2402766 - 2404295 | 57217.6 |
| nadh:flavorubredoxin reductase norw | D5071_11050 | Not Available | Positive | 2404306 - 2405442 | 41157.9 |
| tellurite resistance methyltransferase tehb | D5071_11055 | Not Available | Positive | 2405561 - 2406421 | 32861.0 |
| 3,4-dihydroxy-2-butanone-4-phosphate synthase | D5071_11060 | Not Available | Negative | 2406525 - 2407178 | 23582.1 |
| accessory factor ubik family protein | D5071_11065 | Not Available | Positive | 2407664 - 2407957 | 11249.5 |
| l-methionine/branched-chain amino acid transporter | D5071_11070 | Not Available | Negative | 2408080 - 2409333 | 44752.3 |
| cell division protein zipa | D5071_11075 | Not Available | Negative | 2409487 - 2410542 | 38080.9 |
| sulfate transporter cysz | D5071_11080 | Not Available | Positive | 2410748 - 2411578 | 31218.9 |
| cysteine synthase a | D5071_11085 | Not Available | Positive | 2411741 - 2412709 | 34598.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Soft rot | Causes | PMC11149725 |
| Potato blackleg | Causes | PMC11677604 |
| Potato soft rot | Causes | PMC5376619 |
