Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Pectobacteriaceae
Genus
Pectobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Pectobacteriaceae |
| Genus | Pectobacterium |
| Species | Pectobacterium carotovorum |
| Strain | strain S1.15.11.2D |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Bacilli |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | Not Available |
| Biotic relationship | Free living |
| Host(s) | Viridiplantae, Solanum tuberosum, Daucus carota |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1180518 bp
Thymine Count
1171732 bp
Guanine Count
1226236 bp
Cytosine Count
1240350 bp
Genome Length
4818836 bp
Protein-coding Genes
4141 genes
Non-Coding Genes
122 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| gntr family transcriptional regulator | D5071_10940 | Not Available | Negative | 2378374 - 2379060 | 26256.6 |
| mannitol dehydrogenase family protein | D5071_10945 | Not Available | Negative | 2379258 - 2380724 | 54223.9 |
| mfs transporter | D5071_10950 | Not Available | Negative | 2380999 - 2382369 | 49037.1 |
| zn-dependent oxidoreductase | D5071_10955 | Not Available | Negative | 2382692 - 2383714 | 36922.8 |
| d-galactonate dehydratase family protein | D5071_10960 | Not Available | Negative | 2383744 - 2384958 | 45640.5 |
| lysr family transcriptional regulator | D5071_10965 | Not Available | Negative | 2385250 - 2386152 | 34175.3 |
| alpha/beta hydrolase | D5071_10970 | Not Available | Positive | 2386555 - 2387520 | 34545.1 |
| 4fe-4s dicluster domain-containing protein | D5071_10975 | Not Available | Positive | 2388019 - 2388717 | 25423.9 |
| cytochrome c nitrite reductase subunit nrfd | D5071_10980 | Not Available | Positive | 2388710 - 2389672 | 35438.9 |
| mfs transporter | D5071_10985 | Not Available | Positive | 2389673 - 2391049 | 50591.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Soft rot | Causes | PMC11149725 |
| Potato blackleg | Causes | PMC11677604 |
| Potato soft rot | Causes | PMC5376619 |
