Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Pectobacteriaceae
Genus
Pectobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Pectobacteriaceae |
| Genus | Pectobacterium |
| Species | Pectobacterium carotovorum |
| Strain | strain S1.15.11.2D |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Bacilli |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | Not Available |
| Biotic relationship | Free living |
| Host(s) | Viridiplantae, Solanum tuberosum, Daucus carota |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1180518 bp
Thymine Count
1171732 bp
Guanine Count
1226236 bp
Cytosine Count
1240350 bp
Genome Length
4818836 bp
Protein-coding Genes
4141 genes
Non-Coding Genes
122 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| carbohydrate abc transporter substrate-binding protein | D5071_10835 | Not Available | Negative | 2353370 - 2354662 | 48578.1 |
| glycoside hydrolase family 28 protein | D5071_10840 | Not Available | Positive | 2355237 - 2356571 | 48969.1 |
| 6-carboxytetrahydropterin synthase qued | D5071_10845 | Not Available | Positive | 2356666 - 2357028 | 13750.5 |
| 7-carboxy-7-deazaguanine synthase quee | D5071_10850 | Not Available | Negative | 2357113 - 2357784 | 24920.9 |
| mbl fold metallo-hydrolase | D5071_10855 | Not Available | Positive | 2357987 - 2358970 | 35691.8 |
| atp-binding cassette domain-containing protein | D5071_10860 | Not Available | Negative | 2359027 - 2359776 | 28047.4 |
| ferric-rhodotorulic acid/ferric-coprogen receptor fhue | D5071_10865 | Not Available | Negative | 2359933 - 2362146 | 81055.6 |
| aec family transporter | D5071_10870 | Not Available | Negative | 2362355 - 2363281 | 31491.9 |
| lysr family transcriptional regulator | D5071_10875 | Not Available | Negative | 2363428 - 2364321 | 32635.6 |
| luxr family transcriptional regulator | D5071_10880 | Not Available | Positive | 2364945 - 2365634 | 26719.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Soft rot | Causes | PMC11149725 |
| Potato blackleg | Causes | PMC11677604 |
| Potato soft rot | Causes | PMC5376619 |
