Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Pectobacteriaceae
Genus
Pectobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Pectobacteriaceae |
| Genus | Pectobacterium |
| Species | Pectobacterium carotovorum |
| Strain | strain S1.15.11.2D |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Bacilli |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | Not Available |
| Biotic relationship | Free living |
| Host(s) | Viridiplantae, Solanum tuberosum, Daucus carota |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1180518 bp
Thymine Count
1171732 bp
Guanine Count
1226236 bp
Cytosine Count
1240350 bp
Genome Length
4818836 bp
Protein-coding Genes
4141 genes
Non-Coding Genes
122 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| adenylyl-sulfate kinase | D5071_10785 | Not Available | Negative | 2338802 - 2339419 | 22709.0 |
| sulfate adenylyltransferase subunit cysn | D5071_10790 | Not Available | Negative | 2339421 - 2340911 | 54714.2 |
| sulfate adenylyltransferase subunit 2 | D5071_10795 | Not Available | Negative | 2340923 - 2341831 | 35093.0 |
| uroporphyrinogen-iii c-methyltransferase | D5071_10800 | Not Available | Negative | 2341841 - 2343283 | 51880.5 |
| phosphoadenylyl-sulfate reductase | D5071_10805 | Not Available | Negative | 2343785 - 2344519 | 27733.9 |
| assimilatory sulfite reductase (nadph) hemoprotein subunit | D5071_10810 | Not Available | Negative | 2344532 - 2346265 | 64922.7 |
| nadph-dependent assimilatory sulfite reductase flavoprotein subunit | D5071_10815 | Not Available | Negative | 2346265 - 2348094 | 67409.5 |
| metal-dependent phosphohydrolase | D5071_10820 | Not Available | Negative | 2348384 - 2350108 | 64313.2 |
| eal domain-containing protein | D5071_10825 | Not Available | Positive | 2350652 - 2351392 | 28196.3 |
| hypothetical protein | D5071_10830 | Not Available | Positive | 2351607 - 2353286 | 64206.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Soft rot | Causes | PMC11149725 |
| Potato blackleg | Causes | PMC11677604 |
| Potato soft rot | Causes | PMC5376619 |
