Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Pectobacteriaceae
Genus
Pectobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Pectobacteriaceae |
| Genus | Pectobacterium |
| Species | Pectobacterium carotovorum |
| Strain | strain S1.15.11.2D |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Bacilli |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | Not Available |
| Biotic relationship | Free living |
| Host(s) | Viridiplantae, Solanum tuberosum, Daucus carota |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1180518 bp
Thymine Count
1171732 bp
Guanine Count
1226236 bp
Cytosine Count
1240350 bp
Genome Length
4818836 bp
Protein-coding Genes
4141 genes
Non-Coding Genes
122 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| histidine-type phosphatase | D5071_10685 | Not Available | Positive | 2321399 - 2322706 | 48480.7 |
| Trna-pro | Not Available | Not Available | Positive | 2322830 - 2322906 | Not Available |
| d-glycero-beta-d-manno-heptose 1,7-bisphosphate 7-phosphatase | D5071_10695 | Not Available | Negative | 2323062 - 2323625 | 20690.7 |
| d-methionine abc transporter, atp-binding protein | D5071_10700 | Not Available | Positive | 2323806 - 2324837 | 37641.6 |
| d-methionine abc transporter permease meti | D5071_10705 | Not Available | Positive | 2324830 - 2325483 | 23190.6 |
| metq/nlpa family lipoprotein | D5071_10710 | Not Available | Positive | 2325548 - 2326363 | 29468.4 |
| rcs stress response system protein rcsf | D5071_10715 | Not Available | Positive | 2326482 - 2326892 | 14277.4 |
| trna (n6-threonylcarbamoyladenosine(37)-n6)-methyltransferase trmo | D5071_10720 | Not Available | Positive | 2326889 - 2327605 | 26609.0 |
| proline--trna ligase | D5071_10725 | Not Available | Positive | 2327751 - 2329469 | 63778.5 |
| rna polymerase sigma factor rpos | D5071_10730 | Not Available | Negative | 2329575 - 2330567 | 38088.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Soft rot | Causes | PMC11149725 |
| Potato blackleg | Causes | PMC11677604 |
| Potato soft rot | Causes | PMC5376619 |
