Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Pectobacteriaceae
Genus
Pectobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Pectobacteriaceae |
| Genus | Pectobacterium |
| Species | Pectobacterium carotovorum |
| Strain | strain S1.15.11.2D |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Bacilli |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | Not Available |
| Biotic relationship | Free living |
| Host(s) | Viridiplantae, Solanum tuberosum, Daucus carota |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1180518 bp
Thymine Count
1171732 bp
Guanine Count
1226236 bp
Cytosine Count
1240350 bp
Genome Length
4818836 bp
Protein-coding Genes
4141 genes
Non-Coding Genes
122 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hydroxymethylbilane synthase | D5071_10635 | Not Available | Positive | 2310949 - 2311890 | 33836.9 |
| uroporphyrinogen-iii synthase | D5071_10640 | Not Available | Positive | 2311887 - 2312627 | 27751.3 |
| uroporphyrinogen-iii c-methyltransferase | D5071_10645 | Not Available | Positive | 2312651 - 2313754 | 40438.3 |
| protoheme ix biogenesis protein hemy | D5071_10650 | Not Available | Positive | 2313751 - 2314950 | 45544.4 |
| amidohydrolase | D5071_10655 | Not Available | Negative | 2315632 - 2316789 | 41717.7 |
| amino acid abc transporter atp-binding protein | D5071_10660 | Not Available | Negative | 2316867 - 2317628 | 28018.9 |
| amino acid abc transporter permease | D5071_10665 | Not Available | Negative | 2317638 - 2318309 | 24761.3 |
| amino acid abc transporter substrate-binding protein | D5071_10670 | Not Available | Negative | 2318447 - 2319238 | 28880.4 |
| gnat family n-acetyltransferase | D5071_10675 | Not Available | Negative | 2319235 - 2319777 | 20445.7 |
| adenylosuccinate lyase | D5071_10680 | Not Available | Negative | 2319787 - 2321151 | 50113.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Soft rot | Causes | PMC11149725 |
| Potato blackleg | Causes | PMC11677604 |
| Potato soft rot | Causes | PMC5376619 |
