Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Pectobacteriaceae
Genus
Pectobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Pectobacteriaceae |
| Genus | Pectobacterium |
| Species | Pectobacterium carotovorum |
| Strain | strain S1.15.11.2D |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Bacilli |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | Not Available |
| Biotic relationship | Free living |
| Host(s) | Viridiplantae, Solanum tuberosum, Daucus carota |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1180518 bp
Thymine Count
1171732 bp
Guanine Count
1226236 bp
Cytosine Count
1240350 bp
Genome Length
4818836 bp
Protein-coding Genes
4141 genes
Non-Coding Genes
122 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| sugar/pyridoxal phosphate phosphatase yigl | D5071_10535 | Not Available | Negative | 2289872 - 2290672 | 30047.8 |
| lysophospholipase l2 | D5071_10540 | Not Available | Negative | 2290775 - 2291812 | 39174.7 |
| homoserine/homoserine lactone efflux protein | D5071_10545 | Not Available | Positive | 2291944 - 2292564 | 22211.0 |
| threonine export protein rhtc | D5071_10550 | Not Available | Negative | 2292634 - 2293257 | 22801.8 |
| atp-dependent dna helicase recq | D5071_10555 | Not Available | Negative | 2293300 - 2295126 | 68299.5 |
| phospholipase a | D5071_10560 | Not Available | Negative | 2295275 - 2296147 | 33404.0 |
| thioesterase family protein | D5071_10565 | Not Available | Positive | 2296417 - 2296905 | 17777.5 |
| eama family transporter rard | D5071_10570 | Not Available | Positive | 2297008 - 2297937 | 34974.0 |
| abrb family transcriptional regulator | D5071_10575 | Not Available | Negative | 2297903 - 2298961 | 37507.6 |
| magnesium/nickel/cobalt transporter cora | D5071_10580 | Not Available | Negative | 2299132 - 2300082 | 36577.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Soft rot | Causes | PMC11149725 |
| Potato blackleg | Causes | PMC11677604 |
| Potato soft rot | Causes | PMC5376619 |
