Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Pectobacteriaceae
Genus
Pectobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Pectobacteriaceae |
| Genus | Pectobacterium |
| Species | Pectobacterium carotovorum |
| Strain | strain S1.15.11.2D |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Bacilli |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | Not Available |
| Biotic relationship | Free living |
| Host(s) | Viridiplantae, Solanum tuberosum, Daucus carota |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1180518 bp
Thymine Count
1171732 bp
Guanine Count
1226236 bp
Cytosine Count
1240350 bp
Genome Length
4818836 bp
Protein-coding Genes
4141 genes
Non-Coding Genes
122 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| amidohydrolase | D5071_10485 | Not Available | Negative | 2277447 - 2278775 | 49232.4 |
| had family hydrolase | D5071_10490 | Not Available | Negative | 2278726 - 2279400 | 26361.7 |
| duf84 family protein | D5071_10495 | Not Available | Negative | 2279397 - 2279951 | 20267.1 |
| thymidylate synthase | D5071_10500 | Not Available | Negative | 2279941 - 2280810 | 32813.8 |
| is110 family transposase | D5071_10505 | Not Available | Negative | 2281571 - 2282590 | 37907.1 |
| anaerobic glycerol-3-phosphate dehydrogenase subunit c | D5071_10510 | Not Available | Negative | 2282741 - 2283952 | 45102.4 |
| glycerol-3-phosphate dehydrogenase subunit glpb | D5071_10515 | Not Available | Negative | 2283949 - 2285211 | 45225.6 |
| anaerobic glycerol-3-phosphate dehydrogenase subunit a | D5071_10520 | Not Available | Negative | 2285201 - 2286871 | 60408.5 |
| glycerol-3-phosphate transporter | D5071_10525 | Not Available | Positive | 2287306 - 2288655 | 49977.8 |
| glycerophosphodiester phosphodiesterase | D5071_10530 | Not Available | Positive | 2288731 - 2289798 | 40862.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Soft rot | Causes | PMC11149725 |
| Potato blackleg | Causes | PMC11677604 |
| Potato soft rot | Causes | PMC5376619 |
