Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Pectobacteriaceae
Genus
Pectobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Pectobacteriaceae |
| Genus | Pectobacterium |
| Species | Pectobacterium carotovorum |
| Strain | strain S1.15.11.2D |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Bacilli |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | Not Available |
| Biotic relationship | Free living |
| Host(s) | Viridiplantae, Solanum tuberosum, Daucus carota |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1180518 bp
Thymine Count
1171732 bp
Guanine Count
1226236 bp
Cytosine Count
1240350 bp
Genome Length
4818836 bp
Protein-coding Genes
4141 genes
Non-Coding Genes
122 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | D5071_10425 | Not Available | Positive | 2267232 - 2267723 | 18450.9 |
| aspartate-semialdehyde dehydrogenase | D5071_10430 | Not Available | Negative | 2267897 - 2269000 | 40058.5 |
| yhgn family naat transporter | D5071_10435 | Not Available | Positive | 2269298 - 2269891 | 21760.1 |
| gntp family permease | D5071_10440 | Not Available | Negative | 2270107 - 2271483 | 47293.5 |
| gluconokinase | D5071_10445 | Not Available | Positive | 2271642 - 2272154 | 18742.4 |
| hth-type transcriptional regulator gntr | D5071_10450 | Not Available | Negative | 2272164 - 2273159 | 36637.2 |
| pirin family protein | D5071_10455 | Not Available | Negative | 2273321 - 2274016 | 26384.9 |
| hypothetical protein | D5071_10465 | Not Available | Negative | 2274740 - 2274946 | 7805.3 |
| mfs transporter | D5071_10475 | Not Available | Negative | 2275641 - 2276840 | 42852.6 |
| phosphoribosylglycinamide formyltransferase | D5071_10480 | Not Available | Negative | 2276833 - 2277450 | 23032.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Soft rot | Causes | PMC11149725 |
| Potato blackleg | Causes | PMC11677604 |
| Potato soft rot | Causes | PMC5376619 |
