Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Pectobacteriaceae
Genus
Pectobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Pectobacteriaceae |
| Genus | Pectobacterium |
| Species | Pectobacterium carotovorum |
| Strain | strain S1.15.11.2D |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Bacilli |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | Not Available |
| Biotic relationship | Free living |
| Host(s) | Viridiplantae, Solanum tuberosum, Daucus carota |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1180518 bp
Thymine Count
1171732 bp
Guanine Count
1226236 bp
Cytosine Count
1240350 bp
Genome Length
4818836 bp
Protein-coding Genes
4141 genes
Non-Coding Genes
122 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| deor/glpr family transcriptional regulator | D5071_10375 | Not Available | Negative | 2251680 - 2252438 | 28343.1 |
| rhomboid family intramembrane serine protease glpg | D5071_10380 | Not Available | Negative | 2252463 - 2253296 | 31533.7 |
| thiosulfate sulfurtransferase glpe | D5071_10385 | Not Available | Negative | 2253365 - 2253688 | 11787.6 |
| glycerol-3-phosphate dehydrogenase | D5071_10390 | Not Available | Positive | 2254009 - 2255508 | 56341.1 |
| glycogen phosphorylase | D5071_10395 | Not Available | Negative | 2255598 - 2258045 | 93447.5 |
| glycogen synthase glga | D5071_10400 | Not Available | Negative | 2258121 - 2259560 | 52578.1 |
| glucose-1-phosphate adenylyltransferase | D5071_10405 | Not Available | Negative | 2259589 - 2260866 | 47757.3 |
| glycogen debranching protein glgx | D5071_10410 | Not Available | Negative | 2260902 - 2262878 | 73867.3 |
| 1,4-alpha-glucan branching enzyme | D5071_10415 | Not Available | Negative | 2262879 - 2265056 | 83520.2 |
| sensor histidine kinase | D5071_10420 | Not Available | Positive | 2265429 - 2267147 | 63007.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Soft rot | Causes | PMC11149725 |
| Potato blackleg | Causes | PMC11677604 |
| Potato soft rot | Causes | PMC5376619 |
