Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Pectobacteriaceae
Genus
Pectobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Pectobacteriaceae |
| Genus | Pectobacterium |
| Species | Pectobacterium carotovorum |
| Strain | strain S1.15.11.2D |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Bacilli |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | Not Available |
| Biotic relationship | Free living |
| Host(s) | Viridiplantae, Solanum tuberosum, Daucus carota |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1180518 bp
Thymine Count
1171732 bp
Guanine Count
1226236 bp
Cytosine Count
1240350 bp
Genome Length
4818836 bp
Protein-coding Genes
4141 genes
Non-Coding Genes
122 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | D5071_10325 | Not Available | Negative | 2237249 - 2237728 | 17540.5 |
| alkaline phosphatase | D5071_10330 | Not Available | Negative | 2237741 - 2239486 | 63796.8 |
| helix-turn-helix domain-containing protein | D5071_10335 | Not Available | Negative | 2239611 - 2240594 | 36313.0 |
| lyse family translocator | D5071_10340 | Not Available | Negative | 2240700 - 2241314 | 22552.4 |
| multidrug efflux rnd transporter permease acrd | D5071_10345 | Not Available | Negative | 2241460 - 2244576 | 112929.0 |
| pimeloyl-[acyl-carrier protein] methyl ester esterase | D5071_10350 | Not Available | Negative | 2244759 - 2245526 | 27595.2 |
| dna utilization protein gntx | D5071_10355 | Not Available | Positive | 2245610 - 2246311 | 26664.8 |
| iron-sulfur cluster biogenesis protein nfua | D5071_10360 | Not Available | Positive | 2246372 - 2246947 | 21104.1 |
| 4-alpha-glucanotransferase | D5071_10365 | Not Available | Negative | 2247015 - 2249102 | 78625.6 |
| maltodextrin phosphorylase | D5071_10370 | Not Available | Negative | 2249115 - 2251637 | 94315.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Soft rot | Causes | PMC11149725 |
| Potato blackleg | Causes | PMC11677604 |
| Potato soft rot | Causes | PMC5376619 |
