Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Pectobacteriaceae
Genus
Pectobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Pectobacteriaceae |
| Genus | Pectobacterium |
| Species | Pectobacterium carotovorum |
| Strain | strain S1.15.11.2D |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Bacilli |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | Not Available |
| Biotic relationship | Free living |
| Host(s) | Viridiplantae, Solanum tuberosum, Daucus carota |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1180518 bp
Thymine Count
1171732 bp
Guanine Count
1226236 bp
Cytosine Count
1240350 bp
Genome Length
4818836 bp
Protein-coding Genes
4141 genes
Non-Coding Genes
122 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| ribose-5-phosphate isomerase rpia | D5071_10225 | Not Available | Negative | 2215043 - 2215702 | 23021.8 |
| chromosome initiation inhibitor | D5071_10230 | Not Available | Positive | 2215943 - 2216836 | 33513.6 |
| oxidative stress defense protein | D5071_10235 | Not Available | Negative | 2216927 - 2217652 | 26185.0 |
| arginine exporter argo | D5071_10240 | Not Available | Negative | 2217871 - 2218485 | 22370.9 |
| small-conductance mechanosensitive channel mscs | D5071_10245 | Not Available | Negative | 2218690 - 2219550 | 30817.6 |
| class ii fructose-bisphosphate aldolase | D5071_10250 | Not Available | Negative | 2219687 - 2220763 | 39076.4 |
| phosphoglycerate kinase | D5071_10255 | Not Available | Negative | 2220901 - 2222064 | 41133.7 |
| erythrose-4-phosphate dehydrogenase | D5071_10260 | Not Available | Negative | 2222137 - 2223153 | 37208.3 |
| transketolase | D5071_10265 | Not Available | Negative | 2223468 - 2223577 | 3775.48 |
| methyl-accepting chemotaxis protein | D5071_10270 | Not Available | Positive | 2224007 - 2225674 | 59543.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Soft rot | Causes | PMC11149725 |
| Potato blackleg | Causes | PMC11677604 |
| Potato soft rot | Causes | PMC5376619 |
