Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Pectobacteriaceae
Genus
Pectobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Pectobacteriaceae |
| Genus | Pectobacterium |
| Species | Pectobacterium carotovorum |
| Strain | strain S1.15.11.2D |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Bacilli |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | Not Available |
| Biotic relationship | Free living |
| Host(s) | Viridiplantae, Solanum tuberosum, Daucus carota |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1180518 bp
Thymine Count
1171732 bp
Guanine Count
1226236 bp
Cytosine Count
1240350 bp
Genome Length
4818836 bp
Protein-coding Genes
4141 genes
Non-Coding Genes
122 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| mdr efflux pump acrab transcriptional activator roba | D5071_10175 | Not Available | Positive | 2202890 - 2203777 | 33975.5 |
| phosphoglycerate mutase gpmb | D5071_10180 | Not Available | Negative | 2203766 - 2204416 | 23809.7 |
| non-canonical purine ntp phosphatase | D5071_10185 | Not Available | Positive | 2204467 - 2205006 | 19603.7 |
| trp operon repressor | D5071_10190 | Not Available | Negative | 2205010 - 2205357 | 12613.3 |
| murein transglycosylase | D5071_10195 | Not Available | Negative | 2205430 - 2207364 | 73535.5 |
| energy-dependent translational throttle protein etta | D5071_10200 | Not Available | Positive | 2207711 - 2209378 | 62193.9 |
| hamp domain-containing protein | D5071_10205 | Not Available | Negative | 2209458 - 2211161 | 60495.8 |
| lysr family transcriptional regulator | D5071_10210 | Not Available | Negative | 2211416 - 2212324 | 34043.1 |
| zinc-binding alcohol dehydrogenase family protein | D5071_10215 | Not Available | Positive | 2212461 - 2213462 | 35915.1 |
| phosphoglycerate dehydrogenase | D5071_10220 | Not Available | Negative | 2213516 - 2214748 | 44278.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Soft rot | Causes | PMC11149725 |
| Potato blackleg | Causes | PMC11677604 |
| Potato soft rot | Causes | PMC5376619 |
