Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Pectobacteriaceae
Genus
Pectobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Pectobacteriaceae |
| Genus | Pectobacterium |
| Species | Pectobacterium carotovorum |
| Strain | strain S1.15.11.2D |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Bacilli |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | Not Available |
| Biotic relationship | Free living |
| Host(s) | Viridiplantae, Solanum tuberosum, Daucus carota |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1180518 bp
Thymine Count
1171732 bp
Guanine Count
1226236 bp
Cytosine Count
1240350 bp
Genome Length
4818836 bp
Protein-coding Genes
4141 genes
Non-Coding Genes
122 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| ggdef domain-containing protein | D5071_10125 | Not Available | Positive | 2191481 - 2192569 | 40539.7 |
| transaldolase | D5071_10130 | Not Available | Negative | 2192646 - 2193599 | 35312.3 |
| peroxide stress protein yaaa | D5071_10135 | Not Available | Positive | 2193913 - 2194686 | 29357.1 |
| threonine synthase | D5071_10140 | Not Available | Negative | 2194882 - 2196171 | 47190.3 |
| homoserine kinase | D5071_10145 | Not Available | Negative | 2196175 - 2197104 | 33161.0 |
| bifunctional aspartate kinase/homoserine dehydrogenase i | D5071_10150 | Not Available | Negative | 2197107 - 2199566 | 88705.7 |
| thr operon leader peptide | D5071_10155 | Not Available | Negative | 2199712 - 2199798 | 3064.71 |
| trna/rrna methyltransferase | D5071_10160 | Not Available | Negative | 2199992 - 2200678 | 25392.6 |
| two-component system response regulator arca | D5071_10165 | Not Available | Positive | 2201430 - 2202146 | 27185.6 |
| protein crea | D5071_10170 | Not Available | Negative | 2202202 - 2202684 | 17121.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Soft rot | Causes | PMC11149725 |
| Potato blackleg | Causes | PMC11677604 |
| Potato soft rot | Causes | PMC5376619 |
