Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Pectobacteriaceae
Genus
Pectobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Pectobacteriaceae |
| Genus | Pectobacterium |
| Species | Pectobacterium carotovorum |
| Strain | strain S1.15.11.2D |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Bacilli |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | Not Available |
| Biotic relationship | Free living |
| Host(s) | Viridiplantae, Solanum tuberosum, Daucus carota |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1180518 bp
Thymine Count
1171732 bp
Guanine Count
1226236 bp
Cytosine Count
1240350 bp
Genome Length
4818836 bp
Protein-coding Genes
4141 genes
Non-Coding Genes
122 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| isoleucine--trna ligase | D5071_10075 | Not Available | Negative | 2177775 - 2180588 | 104705.0 |
| bifunctional riboflavin kinase/fad synthetase | D5071_10080 | Not Available | Negative | 2180620 - 2181561 | 34602.1 |
| 30s ribosomal protein s20 | D5071_10085 | Not Available | Positive | 2181987 - 2182250 | 9818.1 |
| transcriptional activator nhar | D5071_10090 | Not Available | Negative | 2182288 - 2183202 | 34680.7 |
| na+/h+ antiporter nhaa | D5071_10095 | Not Available | Negative | 2183235 - 2184431 | 42437.1 |
| molecular chaperone dnaj | D5071_10100 | Not Available | Negative | 2184718 - 2185854 | 41199.9 |
| molecular chaperone dnak | D5071_10105 | Not Available | Negative | 2185963 - 2187870 | 68929.6 |
| acetate uptake transporter | D5071_10110 | Not Available | Positive | 2188353 - 2188928 | 20187.1 |
| mfs transporter | D5071_10115 | Not Available | Negative | 2189042 - 2190379 | 47869.9 |
| molybdopterin adenylyltransferase | D5071_10120 | Not Available | Negative | 2190503 - 2191090 | 21299.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Soft rot | Causes | PMC11149725 |
| Potato blackleg | Causes | PMC11677604 |
| Potato soft rot | Causes | PMC5376619 |
