Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Pectobacteriaceae
Genus
Pectobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Pectobacteriaceae |
| Genus | Pectobacterium |
| Species | Pectobacterium carotovorum |
| Strain | strain S1.15.11.2D |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Bacilli |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | Not Available |
| Biotic relationship | Free living |
| Host(s) | Viridiplantae, Solanum tuberosum, Daucus carota |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1180518 bp
Thymine Count
1171732 bp
Guanine Count
1226236 bp
Cytosine Count
1240350 bp
Genome Length
4818836 bp
Protein-coding Genes
4141 genes
Non-Coding Genes
122 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| abc transporter atp-binding protein | D5071_09975 | Not Available | Negative | 2158261 - 2158923 | 24541.8 |
| hypothetical protein | D5071_09980 | Not Available | Negative | 2158923 - 2159585 | 24808.7 |
| hypothetical protein | D5071_09985 | Not Available | Negative | 2159582 - 2160916 | 51462.5 |
| hypothetical protein | D5071_09990 | Not Available | Negative | 2160903 - 2161748 | 31325.1 |
| hypothetical protein | D5071_09995 | Not Available | Negative | 2161751 - 2162689 | 33902.7 |
| hypothetical protein | D5071_10000 | Not Available | Negative | 2162702 - 2163898 | 42145.1 |
| hypothetical protein | D5071_10005 | Not Available | Negative | 2163891 - 2164379 | 17640.7 |
| acyl carrier protein | D5071_10010 | Not Available | Negative | 2164363 - 2164602 | 9031.98 |
| sdr family oxidoreductase | D5071_10015 | Not Available | Negative | 2164725 - 2165453 | 25790.9 |
| mfs transporter | D5071_10020 | Not Available | Negative | 2166081 - 2167223 | 41212.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Soft rot | Causes | PMC11149725 |
| Potato blackleg | Causes | PMC11677604 |
| Potato soft rot | Causes | PMC5376619 |
