Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Pectobacteriaceae
Genus
Pectobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Pectobacteriaceae |
| Genus | Pectobacterium |
| Species | Pectobacterium carotovorum |
| Strain | strain S1.15.11.2D |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Bacilli |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | Not Available |
| Biotic relationship | Free living |
| Host(s) | Viridiplantae, Solanum tuberosum, Daucus carota |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1180518 bp
Thymine Count
1171732 bp
Guanine Count
1226236 bp
Cytosine Count
1240350 bp
Genome Length
4818836 bp
Protein-coding Genes
4141 genes
Non-Coding Genes
122 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | D5071_09920 | Not Available | Negative | 2149150 - 2149344 | 6930.17 |
| dmt family transporter | D5071_09925 | Not Available | Negative | 2149486 - 2150010 | 17900.6 |
| lysr family transcriptional regulator | D5071_09930 | Not Available | Positive | 2150121 - 2151026 | 33723.8 |
| type 3 dihydrofolate reductase | D5071_09935 | Not Available | Negative | 2151110 - 2151592 | 17996.2 |
| threonine/serine exporter | D5071_09940 | Not Available | Negative | 2151703 - 2152173 | 16855.5 |
| threonine/serine exporter thre family protein | D5071_09945 | Not Available | Negative | 2152164 - 2152985 | 29511.7 |
| hypothetical protein | D5071_09955 | Not Available | Negative | 2154254 - 2155087 | 31381.8 |
| hypothetical protein | D5071_09960 | Not Available | Negative | 2155090 - 2156289 | 46158.1 |
| outer membrane lipoprotein-sorting protein | D5071_09965 | Not Available | Negative | 2156310 - 2157053 | 27714.5 |
| abc transporter permease | D5071_09970 | Not Available | Negative | 2157050 - 2158264 | 44119.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Soft rot | Causes | PMC11149725 |
| Potato blackleg | Causes | PMC11677604 |
| Potato soft rot | Causes | PMC5376619 |
