Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Pectobacteriaceae
Genus
Pectobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Pectobacteriaceae |
| Genus | Pectobacterium |
| Species | Pectobacterium carotovorum |
| Strain | strain S1.15.11.2D |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Bacilli |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | Not Available |
| Biotic relationship | Free living |
| Host(s) | Viridiplantae, Solanum tuberosum, Daucus carota |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1180518 bp
Thymine Count
1171732 bp
Guanine Count
1226236 bp
Cytosine Count
1240350 bp
Genome Length
4818836 bp
Protein-coding Genes
4141 genes
Non-Coding Genes
122 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| udp-n-acetylmuramoyl-l-alanyl-d-glutamate--2, 6-diaminopimelate ligase | D5071_09715 | Not Available | Negative | 2099975 - 2101462 | 53152.5 |
| peptidoglycan glycosyltransferase ftsi | D5071_09720 | Not Available | Negative | 2101449 - 2103212 | 63690.9 |
| cell division protein ftsl | D5071_09725 | Not Available | Negative | 2103236 - 2103556 | 11972.7 |
| 16s rrna (cytosine(1402)-n(4))-methyltransferase | D5071_09730 | Not Available | Negative | 2103553 - 2104497 | 34760.9 |
| division/cell wall cluster transcriptional repressor mraz | D5071_09735 | Not Available | Negative | 2104500 - 2104958 | 17614.2 |
| l-alanine exporter alae | D5071_09740 | Not Available | Positive | 2105847 - 2106284 | 16217.0 |
| catabolite repressor/activator | D5071_09745 | Not Available | Negative | 2106351 - 2107355 | 37703.4 |
| acetolactate synthase small subunit | D5071_09750 | Not Available | Negative | 2107623 - 2108114 | 17985.8 |
| acetolactate synthase 3 large subunit | D5071_09755 | Not Available | Negative | 2108117 - 2109835 | 62387.4 |
| long-chain fatty acid--coa ligase | D5071_09760 | Not Available | Negative | 2110322 - 2112127 | 68741.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Soft rot | Causes | PMC11149725 |
| Potato blackleg | Causes | PMC11677604 |
| Potato soft rot | Causes | PMC5376619 |
