Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Pectobacteriaceae
Genus
Pectobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Pectobacteriaceae |
| Genus | Pectobacterium |
| Species | Pectobacterium carotovorum |
| Strain | strain S1.15.11.2D |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Bacilli |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | Not Available |
| Biotic relationship | Free living |
| Host(s) | Viridiplantae, Solanum tuberosum, Daucus carota |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1180518 bp
Thymine Count
1171732 bp
Guanine Count
1226236 bp
Cytosine Count
1240350 bp
Genome Length
4818836 bp
Protein-coding Genes
4141 genes
Non-Coding Genes
122 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| cell division protein ftsz | D5071_09665 | Not Available | Negative | 2088105 - 2089256 | 40451.5 |
| cell division protein ftsa | D5071_09670 | Not Available | Negative | 2089325 - 2090581 | 45248.6 |
| cell division protein ftsq | D5071_09675 | Not Available | Negative | 2090635 - 2091477 | 31756.0 |
| d-alanine--d-alanine ligase | D5071_09680 | Not Available | Negative | 2091479 - 2092399 | 32792.3 |
| udp-n-acetylmuramate--l-alanine ligase | D5071_09685 | Not Available | Negative | 2092408 - 2093868 | 53001.3 |
| undecaprenyldiphospho-muramoylpentapeptide beta-n-acetylglucosaminyltransferase | D5071_09690 | Not Available | Negative | 2093931 - 2095022 | 38509.7 |
| cell division protein ftsw | D5071_09695 | Not Available | Negative | 2095019 - 2096221 | 44224.5 |
| udp-n-acetylmuramoyl-l-alanine--d-glutamate ligase | D5071_09700 | Not Available | Negative | 2096221 - 2097537 | 47343.6 |
| phospho-n-acetylmuramoyl-pentapeptide- transferase | D5071_09705 | Not Available | Negative | 2097541 - 2098623 | 39802.0 |
| udp-n-acetylmuramoyl-tripeptide--d-alanyl-d- alanine ligase | D5071_09710 | Not Available | Negative | 2098617 - 2099978 | 47639.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Soft rot | Causes | PMC11149725 |
| Potato blackleg | Causes | PMC11677604 |
| Potato soft rot | Causes | PMC5376619 |
