Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Pectobacteriaceae
Genus
Pectobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Pectobacteriaceae |
| Genus | Pectobacterium |
| Species | Pectobacterium carotovorum |
| Strain | strain S1.15.11.2D |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Bacilli |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | Not Available |
| Biotic relationship | Free living |
| Host(s) | Viridiplantae, Solanum tuberosum, Daucus carota |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1180518 bp
Thymine Count
1171732 bp
Guanine Count
1226236 bp
Cytosine Count
1240350 bp
Genome Length
4818836 bp
Protein-coding Genes
4141 genes
Non-Coding Genes
122 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| l-valine transporter subunit ygah | D5071_00375 | Not Available | Negative | 68754 - 69083 | 11753.0 |
| branched-chain amino acid abc transporter permease | D5071_00380 | Not Available | Negative | 69080 - 69811 | 25867.2 |
| mfs transporter | D5071_00385 | Not Available | Negative | 70017 - 71237 | 43013.8 |
| lactonase family protein | D5071_00390 | Not Available | Positive | 71396 - 72556 | 41338.4 |
| hypothetical protein | D5071_00395 | Not Available | Negative | 72689 - 73270 | 21621.7 |
| alpha/beta hydrolase | D5071_00400 | Not Available | Positive | 73361 - 74251 | 33605.2 |
| proline/glycine betaine abc transporter substrate-binding protein prox | D5071_00405 | Not Available | Negative | 74356 - 75360 | 36635.3 |
| proline/glycine betaine abc transporter permease prow | D5071_00410 | Not Available | Negative | 75388 - 76671 | 45283.2 |
| proline/glycine betaine abc transporter atp-binding protein prov | D5071_00415 | Not Available | Negative | 76664 - 77866 | 44146.6 |
| hypothetical protein | D5071_00420 | Not Available | Positive | 78524 - 79108 | 21878.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Soft rot | Causes | PMC11149725 |
| Potato blackleg | Causes | PMC11677604 |
| Potato soft rot | Causes | PMC5376619 |
