Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Pectobacteriaceae
Genus
Pectobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Pectobacteriaceae |
| Genus | Pectobacterium |
| Species | Pectobacterium carotovorum |
| Strain | strain S1.15.11.2D |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Bacilli |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | Not Available |
| Biotic relationship | Free living |
| Host(s) | Viridiplantae, Solanum tuberosum, Daucus carota |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1180518 bp
Thymine Count
1171732 bp
Guanine Count
1226236 bp
Cytosine Count
1240350 bp
Genome Length
4818836 bp
Protein-coding Genes
4141 genes
Non-Coding Genes
122 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| conjugative transfer atpase | D5071_09465 | Not Available | Negative | 2048090 - 2050915 | 105722.0 |
| tigr03751 family conjugal transfer lipoprotein | D5071_09470 | Not Available | Negative | 2050915 - 2051325 | 15121.8 |
| hypothetical protein | D5071_09475 | Not Available | Negative | 2051318 - 2051782 | 17654.0 |
| tigr03752 family integrating conjugative element protein | D5071_09480 | Not Available | Negative | 2051785 - 2053326 | 53590.7 |
| tigr03749 family integrating conjugative element protein | D5071_09485 | Not Available | Negative | 2053323 - 2054219 | 32005.7 |
| tigr03746 family integrating conjugative element protein | D5071_09490 | Not Available | Negative | 2054216 - 2054875 | 25371.4 |
| tigr03750 family conjugal transfer protein | D5071_09495 | Not Available | Negative | 2054872 - 2055246 | 13831.2 |
| tigr03745 family integrating conjugative element membrane protein | D5071_09500 | Not Available | Negative | 2055258 - 2055617 | 12345.7 |
| tigr03758 family integrating conjugative element protein | D5071_09505 | Not Available | Negative | 2055646 - 2055882 | 8434.53 |
| integrative conjugative element protein, raqprd family | D5071_09510 | Not Available | Negative | 2055879 - 2056187 | 11336.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Soft rot | Causes | PMC11149725 |
| Potato blackleg | Causes | PMC11677604 |
| Potato soft rot | Causes | PMC5376619 |
