Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Pectobacteriaceae
Genus
Pectobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Pectobacteriaceae |
| Genus | Pectobacterium |
| Species | Pectobacterium carotovorum |
| Strain | strain S1.15.11.2D |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Bacilli |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | Not Available |
| Biotic relationship | Free living |
| Host(s) | Viridiplantae, Solanum tuberosum, Daucus carota |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1180518 bp
Thymine Count
1171732 bp
Guanine Count
1226236 bp
Cytosine Count
1240350 bp
Genome Length
4818836 bp
Protein-coding Genes
4141 genes
Non-Coding Genes
122 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | D5071_09415 | Not Available | Negative | 2038562 - 2039212 | 24241.9 |
| dna-processing protein dpra | D5071_09420 | Not Available | Negative | 2039209 - 2040102 | 33280.6 |
| hypothetical protein | D5071_09425 | Not Available | Negative | 2040089 - 2040370 | 10309.7 |
| atp-binding protein | D5071_09430 | Not Available | Negative | 2040480 - 2042861 | 91269.7 |
| hypothetical protein | D5071_09435 | Not Available | Positive | 2043051 - 2043278 | 8560.29 |
| hypothetical protein | D5071_09440 | Not Available | Negative | 2043275 - 2044177 | 34405.1 |
| hypothetical protein | D5071_09445 | Not Available | Negative | 2044512 - 2045651 | 43371.6 |
| hypothetical protein | D5071_09450 | Not Available | Negative | 2045682 - 2047175 | 56735.6 |
| hypothetical protein | D5071_09455 | Not Available | Negative | 2047243 - 2047464 | 8357.35 |
| hypothetical protein | D5071_09460 | Not Available | Negative | 2047695 - 2048093 | 14528.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Soft rot | Causes | PMC11149725 |
| Potato blackleg | Causes | PMC11677604 |
| Potato soft rot | Causes | PMC5376619 |
