Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Pectobacteriaceae
Genus
Pectobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Pectobacteriaceae |
| Genus | Pectobacterium |
| Species | Pectobacterium carotovorum |
| Strain | strain S1.15.11.2D |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Bacilli |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | Not Available |
| Biotic relationship | Free living |
| Host(s) | Viridiplantae, Solanum tuberosum, Daucus carota |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1180518 bp
Thymine Count
1171732 bp
Guanine Count
1226236 bp
Cytosine Count
1240350 bp
Genome Length
4818836 bp
Protein-coding Genes
4141 genes
Non-Coding Genes
122 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| cdf family zinc transporter zitb | D5071_09365 | Not Available | Positive | 2029087 - 2030037 | 35176.7 |
| nicotinamide riboside transporter pnuc | D5071_09370 | Not Available | Negative | 2030045 - 2030770 | 27242.7 |
| quinolinate synthase nada | D5071_09375 | Not Available | Negative | 2030830 - 2031891 | 38573.4 |
| hypothetical protein | D5071_09380 | Not Available | Positive | 2032114 - 2032512 | 14888.2 |
| duf554 domain-containing protein | D5071_09385 | Not Available | Negative | 2032527 - 2033243 | 25440.4 |
| conjugal transfer protein trag | D5071_09390 | Not Available | Negative | 2033513 - 2035078 | 57578.5 |
| hypothetical protein | D5071_09395 | Not Available | Negative | 2035088 - 2035432 | 13313.7 |
| integrating conjugative element protein | D5071_09400 | Not Available | Negative | 2035435 - 2036862 | 49716.6 |
| tigr03756 family integrating conjugative element protein | D5071_09405 | Not Available | Negative | 2036878 - 2037846 | 34704.2 |
| tigr03757 family integrating conjugative element protein | D5071_09410 | Not Available | Negative | 2037843 - 2038250 | 14820.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Soft rot | Causes | PMC11149725 |
| Potato blackleg | Causes | PMC11677604 |
| Potato soft rot | Causes | PMC5376619 |
