Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Pectobacteriaceae
Genus
Pectobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Pectobacteriaceae |
| Genus | Pectobacterium |
| Species | Pectobacterium carotovorum |
| Strain | strain S1.15.11.2D |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Bacilli |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | Not Available |
| Biotic relationship | Free living |
| Host(s) | Viridiplantae, Solanum tuberosum, Daucus carota |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1180518 bp
Thymine Count
1171732 bp
Guanine Count
1226236 bp
Cytosine Count
1240350 bp
Genome Length
4818836 bp
Protein-coding Genes
4141 genes
Non-Coding Genes
122 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| molybdate abc transporter atp-binding protein modf | D5071_09315 | Not Available | Positive | 2015780 - 2017255 | 55319.2 |
| udp-glucose 4-epimerase gale | D5071_09320 | Not Available | Positive | 2017454 - 2018473 | 37210.9 |
| galactose-1-epimerase | D5071_09325 | Not Available | Positive | 2018765 - 2019811 | 38716.0 |
| hypothetical protein | D5071_09330 | Not Available | Positive | 2019950 - 2020402 | 16463.7 |
| cation transporter | D5071_09335 | Not Available | Positive | 2020478 - 2020831 | 12708.3 |
| tolc family protein | D5071_09340 | Not Available | Positive | 2020844 - 2022103 | 46289.8 |
| efflux rnd transporter periplasmic adaptor subunit | D5071_09345 | Not Available | Positive | 2022100 - 2023602 | 53888.2 |
| efflux rnd transporter permease subunit | D5071_09350 | Not Available | Positive | 2023599 - 2026736 | 114901.0 |
| 2,3-diphosphoglycerate-dependent phosphoglycerate mutase | D5071_09355 | Not Available | Positive | 2026874 - 2027626 | 28419.6 |
| 3-deoxy-7-phosphoheptulonate synthase arog | D5071_09360 | Not Available | Negative | 2027735 - 2028790 | 38556.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Soft rot | Causes | PMC11149725 |
| Potato blackleg | Causes | PMC11677604 |
| Potato soft rot | Causes | PMC5376619 |
