Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Pectobacteriaceae
Genus
Pectobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Pectobacteriaceae |
| Genus | Pectobacterium |
| Species | Pectobacterium carotovorum |
| Strain | strain S1.15.11.2D |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Bacilli |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | Not Available |
| Biotic relationship | Free living |
| Host(s) | Viridiplantae, Solanum tuberosum, Daucus carota |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1180518 bp
Thymine Count
1171732 bp
Guanine Count
1226236 bp
Cytosine Count
1240350 bp
Genome Length
4818836 bp
Protein-coding Genes
4141 genes
Non-Coding Genes
122 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| mfs transporter | D5071_09265 | Not Available | Positive | 2006057 - 2007301 | 45370.6 |
| sugar phosphate isomerase/epimerase | D5071_09270 | Not Available | Positive | 2007432 - 2008502 | 39906.9 |
| gfo/idh/moca family oxidoreductase | D5071_09275 | Not Available | Positive | 2008499 - 2009650 | 42462.2 |
| laci family transcriptional regulator | D5071_09280 | Not Available | Positive | 2009775 - 2010755 | 35246.1 |
| sugar phosphate isomerase/epimerase | D5071_09285 | Not Available | Negative | 2010832 - 2011686 | 31768.6 |
| molybdenum abc transporter atp-binding protein modc | D5071_09290 | Not Available | Negative | 2011933 - 2012991 | 39259.8 |
| molybdate abc transporter permease subunit | D5071_09295 | Not Available | Negative | 2012991 - 2013680 | 24901.0 |
| molybdate abc transporter substrate-binding protein | D5071_09300 | Not Available | Negative | 2013680 - 2014450 | 27811.3 |
| multidrug efflux pump-associated protein, acrz family | D5071_09305 | Not Available | Negative | 2014596 - 2014751 | 5632.23 |
| molybdenum-dependent transcriptional regulator | D5071_09310 | Not Available | Positive | 2014948 - 2015739 | 28707.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Soft rot | Causes | PMC11149725 |
| Potato blackleg | Causes | PMC11677604 |
| Potato soft rot | Causes | PMC5376619 |
