Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Pectobacteriaceae
Genus
Pectobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Pectobacteriaceae |
| Genus | Pectobacterium |
| Species | Pectobacterium carotovorum |
| Strain | strain S1.15.11.2D |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Bacilli |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | Not Available |
| Biotic relationship | Free living |
| Host(s) | Viridiplantae, Solanum tuberosum, Daucus carota |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1180518 bp
Thymine Count
1171732 bp
Guanine Count
1226236 bp
Cytosine Count
1240350 bp
Genome Length
4818836 bp
Protein-coding Genes
4141 genes
Non-Coding Genes
122 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| methionine--trna ligase | D5071_09215 | Not Available | Positive | 1992764 - 1994794 | 75808.4 |
| formate dehydrogenase-n subunit alpha | D5071_09220 | Not Available | Positive | 1995074 - 1998121 | 112953.0 |
| formate dehydrogenase subunit beta | D5071_09225 | Not Available | Positive | 1998134 - 1999042 | 33284.4 |
| formate dehydrogenase-n subunit gamma | D5071_09230 | Not Available | Positive | 1999035 - 1999670 | 24691.4 |
| sugar abc transporter substrate-binding protein | D5071_09235 | Not Available | Positive | 1999956 - 2001032 | 38350.9 |
| hypothetical protein | D5071_09240 | Not Available | Positive | 2001047 - 2002297 | 45859.0 |
| 6-phosphogluconolactonase | D5071_09245 | Not Available | Negative | 2002351 - 2003349 | 36018.4 |
| Trna-ser | Not Available | Not Available | Positive | 2003652 - 2003739 | Not Available |
| pyridoxal phosphatase | D5071_09255 | Not Available | Positive | 2004013 - 2004834 | 30266.0 |
| glucokinase | D5071_09260 | Not Available | Negative | 2004904 - 2005869 | 34526.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Soft rot | Causes | PMC11149725 |
| Potato blackleg | Causes | PMC11677604 |
| Potato soft rot | Causes | PMC5376619 |
