Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Pectobacteriaceae
Genus
Pectobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Pectobacteriaceae |
| Genus | Pectobacterium |
| Species | Pectobacterium carotovorum |
| Strain | strain S1.15.11.2D |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Bacilli |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | Not Available |
| Biotic relationship | Free living |
| Host(s) | Viridiplantae, Solanum tuberosum, Daucus carota |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1180518 bp
Thymine Count
1171732 bp
Guanine Count
1226236 bp
Cytosine Count
1240350 bp
Genome Length
4818836 bp
Protein-coding Genes
4141 genes
Non-Coding Genes
122 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| polysaccharide export protein | D5071_09165 | Not Available | Negative | 1980528 - 1981664 | 41909.6 |
| undecaprenyl-phosphate alpha-n-acetylglucosaminyl 1-phosphate transferase | D5071_09170 | Not Available | Negative | 1981784 - 1982881 | 40416.0 |
| terc family protein | D5071_09175 | Not Available | Positive | 1983621 - 1985207 | 59425.5 |
| nucleotidyltransferase domain-containing protein | D5071_09180 | Not Available | Positive | 1985343 - 1985726 | 14332.3 |
| duf86 domain-containing protein | D5071_09185 | Not Available | Positive | 1985723 - 1986142 | 16116.4 |
| anaerobic c4-dicarboxylate transporter dcuc | D5071_09190 | Not Available | Negative | 1986191 - 1987546 | 47185.9 |
| outer membrane assembly protein asma | D5071_09195 | Not Available | Negative | 1988011 - 1989846 | 67094.5 |
| dctp deaminase | D5071_09200 | Not Available | Negative | 1989910 - 1990491 | 21322.6 |
| uridine kinase | D5071_09205 | Not Available | Negative | 1990599 - 1991240 | 24543.8 |
| iron-sulfur cluster carrier protein apbc | D5071_09210 | Not Available | Negative | 1991431 - 1992540 | 39412.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Soft rot | Causes | PMC11149725 |
| Potato blackleg | Causes | PMC11677604 |
| Potato soft rot | Causes | PMC5376619 |
