Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Pectobacteriaceae
Genus
Pectobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Pectobacteriaceae |
| Genus | Pectobacterium |
| Species | Pectobacterium carotovorum |
| Strain | strain S1.15.11.2D |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Bacilli |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | Not Available |
| Biotic relationship | Free living |
| Host(s) | Viridiplantae, Solanum tuberosum, Daucus carota |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1180518 bp
Thymine Count
1171732 bp
Guanine Count
1226236 bp
Cytosine Count
1240350 bp
Genome Length
4818836 bp
Protein-coding Genes
4141 genes
Non-Coding Genes
122 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | D5071_09065 | Not Available | Positive | 1959366 - 1959566 | 7842.39 |
| hypothetical protein | D5071_09070 | Not Available | Positive | 1959559 - 1960278 | 26795.9 |
| galu regulator galf | D5071_09075 | Not Available | Negative | 1960334 - 1961230 | 32377.4 |
| glucose-1-phosphate thymidylyltransferase | D5071_09080 | Not Available | Positive | 1961473 - 1962342 | 32098.9 |
| dtdp-4-dehydrorhamnose 3,5-epimerase | D5071_09085 | Not Available | Positive | 1962344 - 1962880 | 20237.2 |
| dtdp-4-dehydrorhamnose reductase | D5071_09090 | Not Available | Positive | 1962877 - 1963728 | 31102.8 |
| phosphomannomutase | D5071_09095 | Not Available | Negative | 1963810 - 1965180 | 50692.5 |
| glycosyltransferase | D5071_09100 | Not Available | Negative | 1965187 - 1965933 | 28007.0 |
| mannose-1-phosphate guanylyltransferase/mannose-6-phosphate isomerase | D5071_09105 | Not Available | Negative | 1965935 - 1967338 | 51918.9 |
| gdp-mannose mannosyl hydrolase | D5071_09110 | Not Available | Negative | 1967348 - 1967806 | 17763.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Soft rot | Causes | PMC11149725 |
| Potato blackleg | Causes | PMC11677604 |
| Potato soft rot | Causes | PMC5376619 |
