Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Pectobacteriaceae
Genus
Pectobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Pectobacteriaceae |
| Genus | Pectobacterium |
| Species | Pectobacterium carotovorum |
| Strain | strain S1.15.11.2D |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Bacilli |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | Not Available |
| Biotic relationship | Free living |
| Host(s) | Viridiplantae, Solanum tuberosum, Daucus carota |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1180518 bp
Thymine Count
1171732 bp
Guanine Count
1226236 bp
Cytosine Count
1240350 bp
Genome Length
4818836 bp
Protein-coding Genes
4141 genes
Non-Coding Genes
122 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| bifunctional acyl-coa synthetase/gnat family n-acetyltransferase | D5071_00330 | Not Available | Negative | 57705 - 60353 | 96778.1 |
| dtw domain-containing protein | D5071_00335 | Not Available | Negative | 60386 - 61099 | 26668.0 |
| thioredoxin trxc | D5071_00340 | Not Available | Negative | 61282 - 61701 | 15509.5 |
| trna/rrna methyltransferase | D5071_00345 | Not Available | Positive | 61951 - 63102 | 42389.3 |
| Ncrna_class:antisense_rna | Not Available | Not Available | Positive | 63079 - 63190 | Not Available |
| duf3574 domain-containing protein | D5071_00350 | Not Available | Positive | 63172 - 63606 | 15545.7 |
| nupc/nupg family nucleoside cnt transporter | D5071_00355 | Not Available | Negative | 63657 - 64841 | 42698.9 |
| multidrug efflux mfs transporter subunit emrb | D5071_00360 | Not Available | Negative | 65047 - 66582 | 55563.5 |
| multidrug efflux mfs transporter periplasmic adaptor subunit emra | D5071_00365 | Not Available | Negative | 66600 - 67775 | 42839.0 |
| transcriptional repressor mpra | D5071_00370 | Not Available | Negative | 68049 - 68564 | 19731.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Soft rot | Causes | PMC11149725 |
| Potato blackleg | Causes | PMC11677604 |
| Potato soft rot | Causes | PMC5376619 |
