Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Pectobacteriaceae
Genus
Pectobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Pectobacteriaceae |
| Genus | Pectobacterium |
| Species | Pectobacterium carotovorum |
| Strain | strain S1.15.11.2D |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Bacilli |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | Not Available |
| Biotic relationship | Free living |
| Host(s) | Viridiplantae, Solanum tuberosum, Daucus carota |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1180518 bp
Thymine Count
1171732 bp
Guanine Count
1226236 bp
Cytosine Count
1240350 bp
Genome Length
4818836 bp
Protein-coding Genes
4141 genes
Non-Coding Genes
122 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| diguanylate cyclase adra | D5071_09015 | Not Available | Negative | 1946571 - 1947632 | 39569.0 |
| prd domain-containing protein | D5071_09020 | Not Available | Negative | 1947865 - 1948701 | 31465.2 |
| glycoside hydrolase family 1 protein | D5071_09025 | Not Available | Negative | 1948792 - 1950219 | 54250.7 |
| peptidase s53 | D5071_09030 | Not Available | Negative | 1950547 - 1952175 | 58774.3 |
| chorismate mutase | D5071_09035 | Not Available | Negative | 1952194 - 1952751 | 20770.1 |
| yjbh domain-containing protein | D5071_09040 | Not Available | Negative | 1953139 - 1955262 | 78935.6 |
| hypothetical protein | D5071_09045 | Not Available | Negative | 1955259 - 1956041 | 28700.2 |
| yjbf family lipoprotein | D5071_09050 | Not Available | Negative | 1956051 - 1956728 | 25117.3 |
| hypothetical protein | D5071_09055 | Not Available | Negative | 1956804 - 1957097 | 8718.19 |
| nadp-dependent phosphogluconate dehydrogenase | D5071_09060 | Not Available | Negative | 1957547 - 1958953 | 51608.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Soft rot | Causes | PMC11149725 |
| Potato blackleg | Causes | PMC11677604 |
| Potato soft rot | Causes | PMC5376619 |
