Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Pectobacteriaceae
Genus
Pectobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Pectobacteriaceae |
| Genus | Pectobacterium |
| Species | Pectobacterium carotovorum |
| Strain | strain S1.15.11.2D |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Bacilli |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | Not Available |
| Biotic relationship | Free living |
| Host(s) | Viridiplantae, Solanum tuberosum, Daucus carota |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1180518 bp
Thymine Count
1171732 bp
Guanine Count
1226236 bp
Cytosine Count
1240350 bp
Genome Length
4818836 bp
Protein-coding Genes
4141 genes
Non-Coding Genes
122 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| aec family transporter | D5071_08915 | Not Available | Positive | 1924803 - 1925762 | 34066.6 |
| hypothetical protein | D5071_08920 | Not Available | Positive | 1925808 - 1926032 | 8422.07 |
| hypothetical protein | D5071_08925 | Not Available | Negative | 1926038 - 1926385 | 12959.3 |
| peptidase m4 family protein | D5071_08930 | Not Available | Negative | 1926382 - 1927425 | 38821.5 |
| exodeoxyribonuclease vii large subunit | D5071_08935 | Not Available | Negative | 1927781 - 1929175 | 52638.2 |
| inosine-5-monophosphate dehydrogenase | D5071_08940 | Not Available | Positive | 1929211 - 1929336 | 4909.08 |
| imp dehydrogenase | D5071_08945 | Not Available | Positive | 1929293 - 1930813 | 54118.4 |
| glutamine-hydrolyzing gmp synthase | D5071_08950 | Not Available | Positive | 1930932 - 1932509 | 58496.1 |
| hypothetical protein | D5071_08955 | Not Available | Positive | 1932500 - 1932712 | 7747.7 |
| gfo/idh/moca family oxidoreductase | D5071_08960 | Not Available | Negative | 1933057 - 1934190 | 40998.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Soft rot | Causes | PMC11149725 |
| Potato blackleg | Causes | PMC11677604 |
| Potato soft rot | Causes | PMC5376619 |
