Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Pectobacteriaceae
Genus
Pectobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Pectobacteriaceae |
| Genus | Pectobacterium |
| Species | Pectobacterium carotovorum |
| Strain | strain S1.15.11.2D |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Bacilli |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | Not Available |
| Biotic relationship | Free living |
| Host(s) | Viridiplantae, Solanum tuberosum, Daucus carota |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1180518 bp
Thymine Count
1171732 bp
Guanine Count
1226236 bp
Cytosine Count
1240350 bp
Genome Length
4818836 bp
Protein-coding Genes
4141 genes
Non-Coding Genes
122 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| iron-sulfur cluster assembly protein isca | D5071_08815 | Not Available | Positive | 1903812 - 1904135 | 11405.4 |
| co-chaperone hscb | D5071_08820 | Not Available | Positive | 1904207 - 1904725 | 20157.8 |
| fe-s protein assembly chaperone hsca | D5071_08825 | Not Available | Positive | 1904801 - 1906651 | 65787.6 |
| isc system 2fe-2s type ferredoxin | D5071_08830 | Not Available | Positive | 1906653 - 1906988 | 12334.5 |
| fe-s cluster assembly protein iscx | D5071_08835 | Not Available | Positive | 1907010 - 1907210 | 7757.03 |
| aminopeptidase pepb | D5071_08840 | Not Available | Positive | 1907425 - 1908732 | 46950.3 |
| enhanced serine sensitivity protein sseb | D5071_08845 | Not Available | Positive | 1908785 - 1909579 | 29526.9 |
| murr/rpir family transcriptional regulator | D5071_08850 | Not Available | Negative | 1909616 - 1910404 | 29227.0 |
| 3-mercaptopyruvate sulfurtransferase | D5071_08855 | Not Available | Negative | 1910445 - 1911314 | 31544.9 |
| 6-phospho-alpha-glucosidase | D5071_08860 | Not Available | Negative | 1911418 - 1912779 | 50782.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Soft rot | Causes | PMC11149725 |
| Potato blackleg | Causes | PMC11677604 |
| Potato soft rot | Causes | PMC5376619 |
