Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Pectobacteriaceae
Genus
Pectobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Pectobacteriaceae |
| Genus | Pectobacterium |
| Species | Pectobacterium carotovorum |
| Strain | strain S1.15.11.2D |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Bacilli |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | Not Available |
| Biotic relationship | Free living |
| Host(s) | Viridiplantae, Solanum tuberosum, Daucus carota |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1180518 bp
Thymine Count
1171732 bp
Guanine Count
1226236 bp
Cytosine Count
1240350 bp
Genome Length
4818836 bp
Protein-coding Genes
4141 genes
Non-Coding Genes
122 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| o-succinylbenzoate synthase | D5071_08710 | Not Available | Positive | 1883759 - 1884730 | 35544.6 |
| o-succinylbenzoate--coa ligase | D5071_08715 | Not Available | Positive | 1884718 - 1886202 | 54143.7 |
| catalase | D5071_08720 | Not Available | Negative | 1886204 - 1886413 | 7847.27 |
| hypothetical protein | D5071_08725 | Not Available | Positive | 1886666 - 1887205 | 18733.0 |
| hypothetical protein | D5071_08730 | Not Available | Positive | 1887205 - 1887390 | 7216.95 |
| tyrosine transporter tyrp | D5071_08735 | Not Available | Negative | 1887407 - 1888615 | 42858.2 |
| nicotinamide mononucleotide deamidase-related protein yfay | D5071_08740 | Not Available | Positive | 1888837 - 1890030 | 43205.0 |
| co-chaperone ybbn | D5071_08750 | Not Available | Negative | 1890582 - 1891442 | 32193.6 |
| sdr family oxidoreductase | D5071_08755 | Not Available | Negative | 1891553 - 1892323 | 27890.8 |
| multifunctional acyl-coa thioesterase i/protease i/lysophospholipase l1 | D5071_08760 | Not Available | Negative | 1892352 - 1893035 | 25715.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Soft rot | Causes | PMC11149725 |
| Potato blackleg | Causes | PMC11677604 |
| Potato soft rot | Causes | PMC5376619 |
